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Research Interests of Participating Faculty

Alice Wright, Biology. Dr. Wright looking at a series of test results

We are interested in investigating the how microorganisms and microbial communities change with agricultural practices. This includes studying how microbial communities (bacterial and fungal) change after the application of pesticides or after a specific agricultural practice. Changes in microbial communities are determined with extraction of total DNA from soil and the genes coding for ribosomal RNA are amplified. The amplified DNA fragments are then analyzed. We also use enrichment techniques to isolate and characterize bacteria that degrade pesticides, specifically pesticide alternatives to methyl bromide. Phylogenetic trees showing the relationship of the isolated degrading organisms are developed. The chemistry and genetics for the degradation of the pesticides in the characterized bacteria is accomplished with gas chromatography (GC), GC-Mass Spectrometry, and transposon mutagenesis. Generation of transposon mutants is also the first step in genetic characterization of these mutants. To determine the diversity of regulatory systems in 2,4-D pathways, we are examining regulatory elements in a collection of organisms that degrade 2,4-D. We hope that our studies will aid in the understanding of the evolution of catabolic pathways. Collaborators include Dr. Jerry Kukor (Rutgers) and Dr. Husein Ajwa (University of California, Davis).

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